Abstract:The market allocation of science and technology resources isn’t only the need of national economic and social development, but also the need of sustainable own development. Imperfect operation system is the main obstacle to the science and technology resources allocation in china. It first introduces the concept, characteristics and conditions of science and technology resources market allocation in colleges and universities. It analyzes of the resource integration system, service supporting system, financial supporting system and industrial supporting system in the operation system. A case study of Kunshan, it analyzes the successful experience and typical practice of resources allocation system. Finally, it put forward the countermeasures and suggestions to improve the allocation system in colleges and universities. The paper provides reference for strengthening the market allocation of in science and technology resources.