Abstract:Currently around strengthening national scientific research funds management and putting forward the countermeasures and Suggestions of operability are very poor. Recently,the two files to a certain extent solve the practice of scientific research funds management part of the problem in the scientific research project and the top design in china. But in theoretical knowledge and practical operating level these are still more places that need further reform and the detailed implementation. In this paper, on the basis of summarizing the existing research results and analyses, the author puts forward the overall restructuring national scientific research management system and the scientific research project management policy Suggestions, as the national scientific research project management and future research management system reform for reference.