Abstract:This paper selects variables based on the characteristics of agricultural research institutes, uses the DEA-Malmquist-Tobit model to conduct static and dynamic analysis and evaluation based on the 2015-2019 data of 31 research institutes in a national agricultural research institution, and analyzes the influence factors of scientific research efficiency of scientific research institutions. The results show that the research efficiency performance of the research institutes is quite different, and there is an overall trend of steady increase during the sample period, and there are certain differences in the research efficiency of the research institutes under different disciplines; the main reason for the research efficiency of the research institutes is pure technical efficiency, among them, for the improvement of scientific research efficiency, the regional economic development level has no significant impact, the unreasonable talent structure has an obviously restricted effect, and the The rewards of achievements have a significant promotion effect. Based on the results of the research, the paper puts forward countermeasures and suggestions from three aspects: adjusting resource allocation, optimizing the talent evaluation and assessment mechanism, and improving the achievement reward program.